Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTFSHPHFFRSVLRWLQVGYPEGVPGPDRVALLSLLRSTPLTEEQI---GEVVRHFTENGSPAVADRVIDRDEIAEFISEVTHHDAGPENIQRVAGILAAAGWPLAGVDVGESESGSDRAPASQG
3OL4 Chain:A ((5-99))
----TTT--FMDNVLGWLHKGYPEGVPPKDYFALLALLKRS-LTEDEVVRAAQAILRSTDGQSP------VTDDDIRNAVHQIIEKEPTAEEINQVAARLASVGWPLA-------------------
General information:
TITO was launched using:
RESULT:
Template:
3OL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37612 for 556 contacts (-67.6/contact) +
2D Compatibility (PS) -10331 + (NN) -10418 + (LL) 844
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -66967.0 ( -120.44 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3OL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OL4-query.scw
PDB file :
Tito_Scwrl_3OL4.pdb
: