Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYA-ATRNPLAIDVSD---PRVIPLQLDVTDAVSVAEAADLATD----VGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASA-FADRIAERSGAIVNVSSVLAWLPLG--MSYGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
4WK6 Chain:A ((9-197))
--NLEGKVALVTGASRGIGKA-IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVASVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86670 for 1357 contacts (-63.9/contact) +
2D Compatibility (PS) -19451 + (NN) -7956 + (LL) 4064
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -124463.0 ( -91.72 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_4WK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WK6-query.scw
PDB file :
Tito_Scwrl_4WK6.pdb
: