Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGD--VVINCAAYTDVDGAESN-EAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEP--RPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGV--VSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
4WPG Chain:A ((5-279)) | -----EMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGN----KPVGQEWVETDHPDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVF-GNYGKNFVFTMEQLAENHSRLTVVNDQHGRPTWTRTLAEFMCYLTENQKAFGYYHLSNDAKEDTTWYDFAKEILKDKAVE---VVPVDSSAFPAKAKRPLNSTMNLDKAKATGFV-IPTWQEAL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124110 for 2306 contacts (-53.8/contact) +
2D Compatibility (PS) -29850 + (NN) -17524 + (LL) 1312
1D Compatibility (HY) -19200 + (ID) 4900
Total energy: -194272.0 ( -84.25 by residue)
QMean score : 0.548
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