Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1UPI Chain:A ((1-201))
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRG-
General information:
TITO was launched using:
RESULT:
Template:
1UPI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111170 for 1829 contacts (-60.8/contact) +
2D Compatibility (PS) -20617 + (NN) -4647 + (LL) 100
1D Compatibility (HY) -15200 + (ID) 6850
Total energy: -158384.0 ( -86.60 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1UPI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UPI-query.scw
PDB file :
Tito_Scwrl_1UPI.pdb
: