Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWY--AYDT-VTFSGEVTAVNDG------LITVKVVGRNTLGDHVTATVELSMRDS
4V12 Chain:A ((230-343))
-------------------LVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAVVPAEGTEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFG-LATATIRFS----
General information:
TITO was launched using:
RESULT:
Template:
4V12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54397 for 680 contacts (-80.0/contact) +
2D Compatibility (PS) -11424 + (NN) -713 + (LL) 1380
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -70604.0 ( -103.83 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_4V12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4V12-query.scw
PDB file :
Tito_Scwrl_4V12.pdb
: