Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSL-----GDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTV--GAHPSARRSAAVLDAAREAVADLVNADPGG---VVLGADRAVLLSLLAEA-SSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDP------------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASLG |
| 1JF9 Chain:A ((4-403)) | -IFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQV-IDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGI--NLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL--------------GLNNIAEYEQNLMHYALSQLESVPDLTLYG-PQNRLGVIAFNLGKHHAYDVGSFLDNYGI-AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272337 for 3202 contacts (-85.1/contact) +
2D Compatibility (PS) -41577 + (NN) -23504 + (LL) 1820
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -364348.0 ( -113.79 by residue)
QMean score : 0.530
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