Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKRMVIGLSTGSDDDDVEVIGGVDPRLIAVQENDSDESSLTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDE---ASRNRLRDIHATSIRELEDGLAPELREELDRLTLPFNEDAVPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRQGALPPGVGKSGQHGHGTGQYL |
1OR4 Chain:A ((68-131)) | -----------------------------AFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIH------LRIGLLPK---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1718 for 292 contacts (-5.9/contact) +
2D Compatibility (PS) -6711 + (NN) -5438 + (LL) 7624
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -11743.0 ( -40.22 by residue)
QMean score : 0.437
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