Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
3G1M Chain:A ((42-235))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN-
General information:
TITO was launched using:
RESULT:
Template:
3G1M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103869 for 1403 contacts (-74.0/contact) +
2D Compatibility (PS) -21354 + (NN) -17265 + (LL) 1172
1D Compatibility (HY) -24800 + (ID) 9700
Total energy: -175816.0 ( -125.31 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3G1M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1M-query.scw
PDB file :
Tito_Scwrl_3G1M.pdb
: