Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4IYI Chain:A ((5-84))
----KITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFR----------------
General information:
TITO was launched using:
RESULT:
Template:
4IYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3363 for 369 contacts (-9.1/contact) +
2D Compatibility (PS) -8719 + (NN) -1728 + (LL) 1952
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -16158.0 ( -43.79 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4IYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IYI-query.scw
PDB file :
Tito_Scwrl_4IYI.pdb
: