Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
2I1U Chain:A ((7-114))
------SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN--
General information:
TITO was launched using:
RESULT:
Template:
2I1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72690 for 775 contacts (-93.8/contact) +
2D Compatibility (PS) -11754 + (NN) -3380 + (LL) 420
1D Compatibility (HY) -15200 + (ID) 5400
Total energy: -108004.0 ( -139.36 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_2I1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I1U-query.scw
PDB file :
Tito_Scwrl_2I1U.pdb
: