Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA |
1JYO Chain:E ((85-102)) | --------------------------------------------------------HALTEKYGETAVNDALLM----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 474 for 64 contacts (7.4/contact) +
2D Compatibility (PS) -1695 + (NN) 2257 + (LL) 17584
1D Compatibility (HY) 1200 + (ID) 50
Total energy: 19770.0 ( 308.91 by residue)
QMean score : -0.343
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