Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS
1HBO Chain:A ((69-126))
MPYQVSTTDTYVE----GDDLHFVNNAAMQQMWDDI--RRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVET
General information:
TITO was launched using:
RESULT:
Template:
1HBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4936 for 241 contacts (20.5/contact) +
2D Compatibility (PS) -5936 + (NN) 475 + (LL) 372
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -2703.0 ( -11.22 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_1HBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HBO-query.scw
PDB file :
Tito_Scwrl_1HBO.pdb
: