Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNHSPAELEARLRLHGLPELGPMRFLRLIEAFGSASSALAAPASAWRTLGVPAEAAAARRSPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAPPLLYVEGAPETLERP-QLAMVGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGAAHEGALEAGGATVAVLGTGLRRLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFPRRNRIISGLSLGVLVVEASPASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGALLVESVGHVLEALRGWAQAEPAEAPAQPLPHPLLALLRAAPYTSEGLAAASGMTLPDVLATLSELELDGRVACEAGTWVHRSG |
| 4LJL Chain:B ((1-195)) | ------------------------------------------------------------------------------MKSHFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLDTPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPK---TIMLSPCSLDFIYPTNNHKVIQEIAQNG-LILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLNE--SDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEM------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99263 for 1710 contacts (-58.0/contact) +
2D Compatibility (PS) -20790 + (NN) -9759 + (LL) 9772
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -135390.0 ( -79.18 by residue)
QMean score : 0.440
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