Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQ--PIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHH---VWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL |
| 1KHO Chain:A ((82-172)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKWYLSYSIPDTAESQIRKFSALARYEWKRGNYKQATFYLGEAMHYFGDADTPYHAANVTAVDSPGHVKFETFAEDRKDQYKINTTGSKTNDAFYSNILTNEDFNSWSKEFARSFAKTAKDLYYSHANMSCSWDEWDYAAKVALANSQKGTSGYIYRFLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12753 for 407 contacts (-31.3/contact) +
2D Compatibility (PS) -8549 + (NN) 2487 + (LL) 10664
1D Compatibility (HY) 0 + (ID) 1200
Total energy: -9351.0 ( -22.98 by residue)
QMean score : -0.053
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