Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHERLDWQVHPMPSAL-YVLKGELRLETRDGAQ-STRVLEGEAAGCLMNIIHR-LIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA
2FQP Chain:A ((16-96))
-----------------------------------------------ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLE-TPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIEIKA----------------
General information:
TITO was launched using:
RESULT:
Template:
2FQP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33000 for 457 contacts (-72.2/contact) +
2D Compatibility (PS) -8055 + (NN) 3140 + (LL) 2092
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -37923.0 ( -82.98 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_2FQP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FQP-query.scw
PDB file :
Tito_Scwrl_2FQP.pdb
: