Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEVDDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV
1T2P Chain:A ((143-181))
------------------------------------------------------YFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTL---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3651 for 141 contacts (-25.9/contact) +
2D Compatibility (PS) -4130 + (NN) -2465 + (LL) 5732
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -7214.0 ( -51.16 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_1T2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T2P-query.scw
PDB file :
Tito_Scwrl_1T2P.pdb
: