Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
4R86 Chain:A ((79-149))
----QLQSAMRKLPQAVQDQGVTVRKTGDTNILTIA--FVSTDGSMDKQDIADYVASNIQD-----PLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGQALNATINAQSLLQTPQQFRD
General information:
TITO was launched using:
RESULT:
Template:
4R86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6277 for 319 contacts (-19.7/contact) +
2D Compatibility (PS) -7403 + (NN) -1723 + (LL) 1240
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -18013.0 ( -56.47 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_4R86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R86-query.scw
PDB file :
Tito_Scwrl_4R86.pdb
: