Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDAAAPVVAYPGCPSEHGLAAATTTQLSR-ADIGAQVALMFVAGD----------------PRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
1GL9 Chain:B ((803-900))
--------------------------------------------ENGLITYHRTDSTRVSDVGQRIAKEYLGDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRWEHFALYDLIFRRFMAS--QCRPFKVVVKKYSIEFDGKTAEEERIVRAEGR
General information:
TITO was launched using:
RESULT:
Template:
1GL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19999 for 449 contacts (-44.5/contact) +
2D Compatibility (PS) -8378 + (NN) -598 + (LL) 2792
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -31133.0 ( -69.34 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_1GL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GL9-query.scw
PDB file :
Tito_Scwrl_1GL9.pdb
: