Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQ--------AVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFA-------------GHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
4DGQ Chain:A ((25-111)) | -------------------------------------DAKVIHFHHGWPLSSDDWDAQLLFFVNKGFR-VVAHDRRGHGRSSQVWD-GHDMDHYADDAAAVVEKLGTHGAMHVGHSTGGGEVVRYIARHGERNVSKAVLISSVPPLMVKTSSNPNGTPKSVFDDFQAHVAANRAQFYLDVPAGPFYGYNRPGAKPSEGVIYNWWRQGMMGSTKAQYDGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9288 for 388 contacts (-23.9/contact) +
2D Compatibility (PS) -6947 + (NN) 101 + (LL) 2232
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -18002.0 ( -46.40 by residue)
QMean score : 0.132
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