Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF
2LON Chain:A ((31-83))
-----VPIGLGGCLVVAAYRIYRLRSRGS-TKMSIHLIHTRVAAQACAVGAIMLGAVYTMYSDYVKRMA
General information:
TITO was launched using:
RESULT:
Template:
2LON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33467 for 268 contacts (-124.9/contact) +
2D Compatibility (PS) -5693 + (NN) -5527 + (LL) 828
1D Compatibility (HY) -400 + (ID) 400
Total energy: -44659.0 ( -166.64 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2LON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LON-query.scw
PDB file :
Tito_Scwrl_2LON.pdb
: