Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGFSGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWSSVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHLTLSGP-----GGEVCKLRLEPRVAANGMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPGLGIYAVTPRREAQPAKVKVAIEALRRAFATDGDERWS |
3MZ1 Chain:A ((85-282)) | ----------------------------------------------------------------------------------------LPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRT--YLAENVDCAIRAGTLTDQSLIARRITEMKFVACASRDFL-ERHPV--PQHPSDLEKNCYVVGYFLPK--QQMPFHFRRGNEEIEVSGRYTMAANESTTYLAAARAGLGVIQAPLFMVREDLRNGTMVPVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQSQN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78800 for 1379 contacts (-57.1/contact) +
2D Compatibility (PS) -19513 + (NN) -3581 + (LL) 9064
1D Compatibility (HY) -12800 + (ID) 2750
Total energy: -108380.0 ( -78.59 by residue)
QMean score : 0.328
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