Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLG-------RPVAIDAAAALAWRQGWLSFYRRPLAEVLD----ELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
| 3MNL Chain:A ((13-75)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33340 for 325 contacts (-102.6/contact) +
2D Compatibility (PS) -6063 + (NN) -3643 + (LL) 18040
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -28456.0 ( -87.56 by residue)
QMean score : 0.419
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