Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSSADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSVEELPLADFERTLAINVRSVFVATQAAVKHMGDGGRVISIGSTNAERMPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPDDGDFAEALKGLMALPRYARSEEIASFVAYLAGPEAAYITGASLTIDGGFSA
3WTB Chain:A ((3-246))
------HMTHRVALITGGSRGIGAAIALKLAQDGFDIAITYARNEKAAQKVVSEVEALGRKAVAVQADGGSTDGNIAAITKTHEAFGRLDALVCNAGIYPYGPIAQMTVTQIEEVLNLNLRAAMVETVEALKYMKTGGRLIYIGSAFGERAPFPGISLYAATKAGLIGFTKGVARDLGPQGITANVVEPGPIATDLNPEDGAAAAVIRKFTATESYGKVNDIARTVSFLASPDASYITGASILVDGGLVA
General information:
TITO was launched using:
RESULT:
Template:
3WTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125782 for 2134 contacts (-58.9/contact) +
2D Compatibility (PS) -27294 + (NN) -18825 + (LL) 460
1D Compatibility (HY) -18800 + (ID) 5200
Total energy: -195441.0 ( -91.58 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3WTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WTB-query.scw
PDB file :
Tito_Scwrl_3WTB.pdb
: