Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
1OIL Chain:A ((220-272))
-----------------------------VFGVTGATDTSTIPL-------VDPANALDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLK
General information:
TITO was launched using:
RESULT:
Template:
1OIL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1477 for 301 contacts (4.9/contact) +
2D Compatibility (PS) -5152 + (NN) -1877 + (LL) 2976
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -5876.0 ( -19.52 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_1OIL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OIL-query.scw
PDB file :
Tito_Scwrl_1OIL.pdb
: