Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAARKVQITMKTPARRRVGLLLASLCLPLFAQAAETQPTHEFSLDNGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEASRVLRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHLSLPVDQFKSEIEVIKEERRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDDLRHWYESWYAPNNATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKPLELAEPGERRLKLYVRTQLPNLIMGFNVPSLGSSENPREVNALRLIGALLDGGYSARLASRLERGEELVAGASTYYDAFNRG-DSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGMVYEKDSIAAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLAQVLPVKAEEKEARHE |
| 3AMI Chain:A ((33-450)) | --------------------------------------TFETTLPNGLKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAAMGGRDNAFTTRDYTAYYQQVPSSRLSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHPYRVPVIGWMNDIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDKSRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRGQQGLFILEGVPS--KGVTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQDSLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113539 for 3512 contacts (-32.3/contact) +
2D Compatibility (PS) -46725 + (NN) -28113 + (LL) 4864
1D Compatibility (HY) -32000 + (ID) 9450
Total energy: -224963.0 ( -64.06 by residue)
QMean score : 0.540
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