Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARE--LLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
1XM3 Chain:A ((4-252)) | ----------LTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIF--------LEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCD---MIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSPGE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95660 for 1926 contacts (-49.7/contact) +
2D Compatibility (PS) -24759 + (NN) 245 + (LL) -100
1D Compatibility (HY) 8800 + (ID) 1600
Total energy: -113074.0 ( -58.71 by residue)
QMean score : 0.200
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