Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLSF-LATSDGASLAYRLDGAAE--KPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLAN----TSAWLGPAAQ-WDERIAAVLQAEDMSETAAGF------LGNWFPPALLERAEPVVERFRAML--MATNRHGLAGSFAAVRDT---DLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLPAV-HLSNVEFPQAFEGAVLSFLGAA |
| 4Q3L Chain:A ((23-291)) | ------SIFTYQEKDIYYEIDGTLDINSDVIVILNGIMMSTKSWDAFVENFSKNHVLLRYDMFDQGQSSKIEESYTQTIQVELLKNLLEHLGIAQANIVGISYGASIALQFAAKYPTMIKRMVVANVVAKTSPWLKDIGDGWNE----------VAKTGNGLAYYHITIPYIYSPQFYTLHNDWMEKRKELLVPLFSTRTFLDRMIRLTKSAETHDVIKDLPNIKTPTLIISSEEDYLTPPFEQKYLQEHLQNAELVSIPNCGHASMYEVPKTFTALVLGFFGQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148420 for 1993 contacts (-74.5/contact) +
2D Compatibility (PS) -26151 + (NN) -4620 + (LL) 1488
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -202703.0 ( -101.71 by residue)
QMean score : 0.399
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