Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGL-RWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
4EQ7 Chain:A ((7-314)) | ----------------------------SWGGTTQDAQKAAWAEKFMVETGINVLQDGPT-DYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVI-DKTKLDPRFVTDYSVGSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTADKLY-----PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIAKSLPD--QQTESQVNADMNYWAQHRDEIGERWYAWQAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114516 for 2620 contacts (-43.7/contact) +
2D Compatibility (PS) -33716 + (NN) -18611 + (LL) 3040
1D Compatibility (HY) -18800 + (ID) 5250
Total energy: -187853.0 ( -71.70 by residue)
QMean score : 0.458
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