Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVA----VLDDVS--RFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ |
| 2J7U Chain:A ((396-435)) | -----------------------------------------------------------------------------------------------------------------------------------------------SGDDCVVKPIDDRFANALLALNDMGKVRKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2J7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -630 for 113 contacts (-5.6/contact) +
2D Compatibility (PS) -3360 + (NN) 63 + (LL) 11220
1D Compatibility (HY) -2400 + (ID) 800
Total energy: 4093.0 ( 36.22 by residue)
QMean score : 0.118
|
|
|