Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
4MTT Chain:A ((1-128))
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGT---
General information:
TITO was launched using:
RESULT:
Template:
4MTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67680 for 898 contacts (-75.4/contact) +
2D Compatibility (PS) -13714 + (NN) -4927 + (LL) 176
1D Compatibility (HY) -17200 + (ID) 6400
Total energy: -109745.0 ( -122.21 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4MTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTT-query.scw
PDB file :
Tito_Scwrl_4MTT.pdb
: