Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPGYLVEALSQVLREPP---HFDSLPWPRAVQMVRDGHRDGLVGAYGLDGLRVGSEPIGWVGLAFYTRHDSDWHYSGDAS------LLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQ---PLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 4KR5 Chain:A ((20-227)) | ----------------------PFEFQNDD---------KQFTGIDVDLLNAIAKNQGFKLKWNFIGFQAAVDSVQSGHADGMMSGMSITDAR---KQVFDYGSPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAKNG---TASFDYLNAHAKEYGYTVKTFTDATTMYSSLNN---GSINALMDDEPVIKYAIKQGQKFATPIK---PIPDGQYGFAVKKGSNPELIEM------FNNGLANLRANGEYDKIIDKYLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43315 for 1423 contacts (-30.4/contact) +
2D Compatibility (PS) -21198 + (NN) -8209 + (LL) 3964
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -82758.0 ( -58.16 by residue)
QMean score : 0.275
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