Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
2BTI Chain:A ((4-60))
-LILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQP---
General information:
TITO was launched using:
RESULT:
Template:
2BTI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10835 for 311 contacts (34.8/contact) +
2D Compatibility (PS) -6600 + (NN) -3337 + (LL) 32
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -9620.0 ( -30.93 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2BTI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BTI-query.scw
PDB file :
Tito_Scwrl_2BTI.pdb
: