Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKHIIARTPARSLVDGLTSSHLGKPDYAKALEQHNAYIRALQTCDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGEFVSKPEFQDFNIIEIPEEESYAANCIWVNERVIMPAGYPRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF
3BPB Chain:A ((1-254))
MFKHIIARTPARSLVDGLTSSHLGKPDYAKALEQHNAYIRALQTCDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLGLKTGLAYLEHNNLLAAGEFVSKPEFQDFNIIEIPEEESYAANCIWVNERVIMPAGYPRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF
General information:
TITO was launched using:
RESULT:
Template:
3BPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156367 for 2259 contacts (-69.2/contact) +
2D Compatibility (PS) -27503 + (NN) -10161 + (LL) 0
1D Compatibility (HY) -35200 + (ID) 12650
Total energy: -241881.0 ( -107.07 by residue)
QMean score : 0.836
(partial model without unconserved sides chains):
PDB file :
Tito_3BPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPB-query.scw
PDB file :
Tito_Scwrl_3BPB.pdb
: