Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVD--AIIERYKDLMVEIPPADRQPGLSLL-WPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAF--GRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
3N0X Chain:A ((50-126))
---------ITKDDQSKPDLSKAALAEAYQDDGADIAIGTSSSAAALADLPVAEE---NKKILIVEPAVADQITGEKWNRYIFRTGRNSSQDAISNAVAIGKQGVTIATLAQDYAFGR
General information:
TITO was launched using:
RESULT:
Template:
3N0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17663 for 499 contacts (35.4/contact) +
2D Compatibility (PS) -6948 + (NN) 2294 + (LL) 516
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 9925.0 ( 19.89 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_3N0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0X-query.scw
PDB file :
Tito_Scwrl_3N0X.pdb
: