Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLKLVQTLAGLLGEGESGKAEVLAVKEGLANNFQVLLKLTLANSGQSLVEVQSNRPLVPGNLLNVSATSNTSVVATLLDSMAGAGPLSSLDLEQLPPGTLLQGKVLSSTALPADKAQQVVYRVLLNLLNTPLAGSKLSLDSPQALPVGSLLTALVKNSQQIDFLPLSGRLDQLALGQ--QLAGQSARQASLEGLFA-ALQGLNGRNDLPDSLRQAVERLFAGLPEAQKMGDSKLLGQALQQSGLFLEARLMQGATDHLGHDLKANLLRLFAQLSPLPPTGAQAPGMFAGNTANLAQALPAFVRNALGNLGQSANKTQALNFPLPSKVLQLFDEDMELESLLRLAAAAISRLQTHQLSSLAQTSTLPDGTQLATWQMEVPMRHQHSVVPLQVKFQEEQRKTGEEARESLWRVELAFDLEPLGPLHAQATLLRGSLSSQLWAERDATARLVEHELGHLRQRLRDAGLTVGEITCQRGRPPQGPRATIEQRWVDETA |
2YG9 Chain:A ((128-190)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------SGQIDFAHLSGQPDELVIAELVQLPGIGRWTAEMFLLFALARPDVFSSGDL--ALRQGVERLYPGEDWRDVTARWAPYRSLASRYLWANSARMQAGGAPL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4686 for 303 contacts (15.5/contact) +
2D Compatibility (PS) -6415 + (NN) -2855 + (LL) 27572
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: 16788.0 ( 55.41 by residue)
QMean score : 0.403
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