Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNVFSLLLAREARLLFRRPAELANPLVFFAIVIALFPLAVGPESQLLQTLSPGLVWVAALLAVLLSLEGLFRSDFEDGSMEQWVLSPHPLALLVLAKVLAHWLFSGLALVLMSPLFALMLGLPARCIPVLLLSLLLGTPVLSLLGAVGAALTVGLKRGGLLLALLILPLYIPVLILGSGALQASLQGLPSSGHLLWLASLTALALTLTPFAIAAGLKISVGE |
3Q9D Chain:A ((19-35)) | -----------------------------------------------------------------------------EGNLKRIFATPIGYTTFREFQNVVFNCANGQQEIANFFFEMLINGKLTQELAPQQKQAAHSLIAEFMMPIRVAKDIHERGEFINFITSDMLTQQERCIFLNRLARVDGQEFLLMTDVQNTCHLIRHLLARLLEAQKNPVGEKNLQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1637 for 56 contacts (-29.2/contact) +
2D Compatibility (PS) -1731 + (NN) -901 + (LL) 7516
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 1947.0 ( 34.77 by residue)
QMean score : -0.056
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