Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4B0C Chain:A ((2-171))
-TKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTST--F
General information:
TITO was launched using:
RESULT:
Template:
4B0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131326 for 1322 contacts (-99.3/contact) +
2D Compatibility (PS) -17709 + (NN) -8128 + (LL) 104
1D Compatibility (HY) -25200 + (ID) 8400
Total energy: -190659.0 ( -144.22 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4B0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B0C-query.scw
PDB file :
Tito_Scwrl_4B0C.pdb
: