Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIACLDLEGVLVP-EIWIAFAEKTG---IDAL--KATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL
4B6J Chain:A ((3-173))
-KVAVIDIEGTLTDFEFWREMARITGKREIEELLEKGLSGEVEWLDSLLK---RVGLIRGIDEGTFLRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELG-DEFMANRAIFEDG-KFQGIRLRFRD-KGEFLKRFRDGF--ILAMGDGYADAKMFERADMGI------AVGREIPGADLLVKDLKELVDFIKNLK-----
General information:
TITO was launched using:
RESULT:
Template:
4B6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96502 for 1243 contacts (-77.6/contact) +
2D Compatibility (PS) -17367 + (NN) -6689 + (LL) 1828
1D Compatibility (HY) -11600 + (ID) 2700
Total energy: -133030.0 ( -107.02 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_4B6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B6J-query.scw
PDB file :
Tito_Scwrl_4B6J.pdb
: