Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTHLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKIDGCQAVADAITAEGGKAT-AIACHIGEMEQIQNVFAQIREQFGRLDILVNNAATNPQFCNVLETDLGAFQKTVDVNIRGYYFMSIEGGKLMKEHGGGSIINVASINGVSPGEFQGI--YSVTKAAVISMTKVFAKECAQFGIRCNALLPGLTDTKFASALVKNDAIRNLALQRIPLKRVAEPSEMAGAVLYLASEASSYTTGVALNVDGGFLS
1VL8 Chain:A ((17-264))------FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA


General information:
TITO was launched using:
RESULT:

Template: 1VL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153216 for 2146 contacts (-71.4/contact) +
2D Compatibility (PS) -26533 + (NN) -6982 + (LL) 400
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -210831.0 ( -98.24 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1VL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VL8-query.scw
PDB file : Tito_Scwrl_1VL8.pdb: