Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDN---LELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3B4P Chain:A ((29-185))
--------NTSENRAQVAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLPS
General information:
TITO was launched using:
RESULT:
Template:
3B4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37842 for 1009 contacts (-37.5/contact) +
2D Compatibility (PS) -16630 + (NN) -7001 + (LL) 964
1D Compatibility (HY) -13600 + (ID) 4100
Total energy: -78209.0 ( -77.51 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3B4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B4P-query.scw
PDB file :
Tito_Scwrl_3B4P.pdb
: