Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFLRPLPESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE
3R77 Chain:A ((4-208))
-TGIPSIVPYALPTSRDLPANLAQWHIDPERAVLLVHAMQRYFLRPLPDALRDQVVGNAARIRQWAADNGVPVAYTAQPGSMNEEQRGLLKDFWGPGMKASPTDREVVDALAPQPGDWLLTKWRYSAFFNSDLLQRLHASGRDQLILCGVYAHVGVLISSVDAYSNDIQPFLVADAIADFSKEHHWMAMEYAASRCAMVITTDEVV-
General information:
TITO was launched using:
RESULT:
Template:
3R77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181524 for 1797 contacts (-101.0/contact) +
2D Compatibility (PS) -21872 + (NN) -13666 + (LL) 312
1D Compatibility (HY) -27600 + (ID) 7900
Total energy: -252250.0 ( -140.37 by residue)
QMean score : 0.811
(partial model without unconserved sides chains):
PDB file :
Tito_3R77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R77-query.scw
PDB file :
Tito_Scwrl_3R77.pdb
: