Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHE-VAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
2D5I Chain:A ((2-194))
-KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDG-ELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTP-YLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2D5I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111271 for 1457 contacts (-76.4/contact) +
2D Compatibility (PS) -21662 + (NN) -11853 + (LL) 356
1D Compatibility (HY) -17600 + (ID) 4250
Total energy: -166280.0 ( -114.12 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2D5I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D5I-query.scw
PDB file :
Tito_Scwrl_2D5I.pdb
: