Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPRSMRQAYTRLDASHYLYENLEGSAFKAVLLVDEQGLVIDYPGLFQRL
2L9C Chain:A ((75-160))
---------------------------------------------------------------FHIIINEECSEIFLVADK----TEKAGEYSVTYDGSNTFTILKTDYDNYIMIHLINKKDGETFQLMELYGREPDL-SSDIKEKFAQLSEEHGIVRENIIDLTNANRCLEARE------------
General information:
TITO was launched using:
RESULT:
Template:
2L9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15899 for 457 contacts (-34.8/contact) +
2D Compatibility (PS) -9110 + (NN) -2064 + (LL) 5324
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -29149.0 ( -63.78 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_2L9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9C-query.scw
PDB file :
Tito_Scwrl_2L9C.pdb
: