Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRAINDPGNEDPGSLLETDADALLGGAAAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLLPA
4ZSV Chain:A ((209-305))
---------------------------------EERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVAACAPLL--
General information:
TITO was launched using:
RESULT:
Template:
4ZSV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63665 for 798 contacts (-79.8/contact) +
2D Compatibility (PS) -11234 + (NN) -10533 + (LL) 1060
1D Compatibility (HY) -12400 + (ID) 4750
Total energy: -101522.0 ( -127.22 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_4ZSV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZSV-query.scw
PDB file :
Tito_Scwrl_4ZSV.pdb
: