Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDP---QLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKS---LPAEIHQVIERQYQGVLRHHDRVRALRDARA
1N1Q Chain:A ((1-148))
MKTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLE-EASIKE---ATGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGLEKHVWMLEAFLE---
General information:
TITO was launched using:
RESULT:
Template:
1N1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1109 for 1073 contacts (-1.0/contact) +
2D Compatibility (PS) -15691 + (NN) -11023 + (LL) 556
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -31017.0 ( -28.91 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1N1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N1Q-query.scw
PDB file :
Tito_Scwrl_1N1Q.pdb
: