Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYAIAEDTLPARVLKELLLYRRRYPEHRQSASEADEIRRIEQVQLPRIAAFIEAGEPIEFVLPAFPAKSPNPGKVLDSRPDMAERLSLSFLNHLCQRIQLFYAPGAKITVCSDGRVFGDLVRIGDAHISAYQDALRLMIEEIGATHIGVFNLEDVRAFEAQRDNHEQLRQLLIGGYAEPLESIRETLLASEEGLLLYRAITRFLYEDGLTPDYQGSKTALQRDAKERAYGVIQRSWAWGALLADQFPRAIRLSIHPQPADSLKFGIHMMPTRDDWLTPWHGVAVNTEDRFVLMKRSEVLELGGELVQINGQPSHYRLPARAARRAAVA |
| 4GIG Chain:A ((72-119)) | ---------------------------------------------------------------------------------------------------------------------GSVIRAASDHRFLTTDYQLLAIEEIFARQLDLLTLENIKQTEEALDNH------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14977 for 232 contacts (-64.6/contact) +
2D Compatibility (PS) -5311 + (NN) -1502 + (LL) 21272
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -2918.0 ( -12.58 by residue)
QMean score : 0.061
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