Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
3SN1 Chain:A ((174-193))
----------------------------LHAWRPGFAVPFQPALNVDR----
General information:
TITO was launched using:
RESULT:
Template:
3SN1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -879 for 68 contacts (-12.9/contact) +
2D Compatibility (PS) -2000 + (NN) -1801 + (LL) 2792
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -3588.0 ( -52.76 by residue)
QMean score : 0.030
(partial model without unconserved sides chains):
PDB file :
Tito_3SN1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SN1-query.scw
PDB file :
Tito_Scwrl_3SN1.pdb
: