Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQ----GRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVA---PPEGGYSIERGAKVYAAQCAICHGADGQGQM-ALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERP--QDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 4WQA Chain:A ((5-237)) | -------------------------TVALTVPAAALLPDGALGESIVRGRRYLSDTPAQLPDFVGNGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRIGD-FERSLNGRALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVH----GEALYQARCLACHGADGSGTLDADGRYLFPPLWGPRSFNTGAGMNRQATAAGFIKHKM------SLSDEEAWDVAGFVLTHPRPLF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44860 for 1690 contacts (-26.5/contact) +
2D Compatibility (PS) -22842 + (NN) -12377 + (LL) 3792
1D Compatibility (HY) -12400 + (ID) 4500
Total energy: -93187.0 ( -55.14 by residue)
QMean score : 0.477
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