Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPPYPEDEHSRQAYVDQLGLLEEGADEVFEEILAAATSYFQTPIALISILDHQRQWFRASIGLDIRQTPRRDSFCAYAILGKGVFEVADATLDPRFRDNPYVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREPRGPLAERDVAMLEHFARLVMARIHTLRSTNYIDEPTGLYNRLRLQEDVSLRLQ---RDGALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAELP-DFTLYKISPTRFGLLLPRQQQEE---------TESVCLRLLRAFESPVVCRGIPIKANVGLGVLPLADDTLDGDQDWLRLVVSAADDARDRGVGWARYNPPLDQAQQRA-----FTLLTSLSQAIGTEEGFHLVYQPKIDLPTGRCTGVEALLRWRHPQLGFVSPAEFVPLAEKTALMRPLSDWVLRHAMAQLAQWNARNIPL-RLAINVSASDMEDSSFLEEAVRLAKTYDIDLSALELEFTESVLIRDASAVGSVLLRARELGMGIAVDDFGTGYSNWTYLRDLPITAIKLDQSFTRDLAGSPKAQSVTQAVIGLASQLGYRVVAEGIETHDTFHLLQAWGCHEGQGYLIAQPMLPEQLEDWLRR |
| 4RNF Chain:A ((23-444)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------YYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLM--FLDLD-----NDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPF--TLEGREFFVTASIGVALSPQ-----DGAE--LSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGE-FVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVNNFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231043 for 3094 contacts (-74.7/contact) +
2D Compatibility (PS) -42621 + (NN) -19094 + (LL) 13224
1D Compatibility (HY) -34000 + (ID) 7000
Total energy: -320534.0 ( -103.60 by residue)
QMean score : 0.426
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