Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
4QMA Chain:A ((13-203))
------LAPLREFITGLSALLDEQPGEARILREGGALLARLVARDDWLPDAFAQPHPEYYQQMLLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGANIGGVRRSVYTEAGERKPFISGYSNPYLPNPWDRSK----
General information:
TITO was launched using:
RESULT:
Template:
4QMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94982 for 1477 contacts (-64.3/contact) +
2D Compatibility (PS) -20632 + (NN) -13137 + (LL) 660
1D Compatibility (HY) -21600 + (ID) 6150
Total energy: -155841.0 ( -105.51 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4QMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QMA-query.scw
PDB file :
Tito_Scwrl_4QMA.pdb
: